YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ES1_RAT
Protein type:	Globular with Signal Peptide
Type Confidence:	0.94
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAVRVLVSP RLASALLPLS GRHRTTSQRA AIHSSAPRPR ARVALVLSGC GVYDGTEIHE  60
   61 ASAILVHLSR GGAEVHIFAP DVPQMHVIDH TKGEPSEKES RNVLAESARI ARGKITNLAQ 120
  121 LSAANHDAAI FPGGFGAAKN LSTFAVDGKD CKVNKEVERV LKEFHGAKKP IGLCCIAPVL 180
  181 AAKVIKGVEV TVGHEQEEGG KWPYAGTAEA VKALGAKHCV KGVTEAHVDQ KNKVVTTPAF 240
  241 MCETELHHIH DGIGAMVKKV LELTGK

Type	Start	End	Confidence
Signal Peptide	1	27	0.91
N-region	1	18
H-region	19	24
C-region	25	27
Cleavage Site	27	28
Non-Cytoplasmic	28	266	0.99