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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|34851657, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.97
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAALSLQPS TTASATTTAT AAALGEVEDE GLLASLFRDR FPEAQWREKP DVGRYLRELS  60
   61 GSGLDRLRRE PERLAEERAQ LLQQTRDLAF ANYKTFIRGA ECTERIHRLF GDVEASLGHL 120
  121 LDRLPSFQQS CRNFVKEAEE ISSNRRMNTL TLNRHTEILE ILEIPQLMDT CVRNSYYEEA 180
  181 LELAAYVRRL ERKYSSIPVI QGIVNEVRQS MQLMLSQLIQ QLRTSIQLPA CLRVIGYLRR 240
  241 MDVFTEAELR VKFLQARDAW LRSILTAIPN DDPYFHITKT IEACRVHLFD IITQYRAIFS 300
  301 DEDPLLPPAM GQYTVNEGAI FHGWVLQKIS QFLQVLETDL YRGIGGRLDS LLGQCMYFGL 360
  361 SFSRVGADFR GQLAPVFQRV AINTFQKAVE EAVEKFQDEM TSYTLISAAA ILGSSNMPAA 420
  421 VPATQPGTLQ PPMVLLDFPP LACFLNNILV AFNDLRLCCP VALAQDVTGA LEDALMKVTK 480
  481 TILAFHRAEE AVFSSGEHEI FVQFCTAFLE DLVPYLNRCL QVLFPPAQIA QTLGISPTQL 540
  541 SKHGNLGHVN ISAIQEPLAF ILPKREAVFC LDDQELVPDL VAPAPELPAE QRSLEPIASA 600
  601 TLESGSEKGE SGEPLPQEPV EGEPLPAEPP SEEP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle