YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|34859065, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MACAGLLTVC LLGPPAPQPT RHSAPAAGHA LFQDVFRRAD KNDDGKLSFE EFQNYFADGV  60
   61 LSSAELRELF SGIDEQLTDN LETEKLCDYF STHLGVYRPV LAALESLNRA VLTAMDTTKL 120
  121 EYEQASKVDQ FVTRFLLRET ANQLQALQNS LEGASDTLEA QAQRLDEENI KVQSRSCGSR 180
  181 RAGRRALRSI SWSPTWSPGS SDTGRSSEAE LQWRLQVNRL QELIDQLECK APRLEPMHEG 240
  241 DLAKGLDSHI LVAQRQVQVA EDALQDFHRA LCCYMNFTGA QSHCLHVSAQ KMLDNAAFTL 300
  301 YEFWQDEASW RRHQQSPCSK AFQRTLIDHL RAPDTLTTVF FPASWWIMNN N

Type	Start	End	Confidence
Signal Peptide	1	23	0.98
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	351	0.99