YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109507708, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRGGEELDGF EGEASSTSMI SGASSPYQPT TEPVSQRRGL AGLRCDPDYL RGALGRLKVA  60
   61 QVILALIAFI CIETIMECSP CEGLYFFEFV SCSAFVVTGV LLILFSLNLH MRIPQINWSL 120
  121 TDLVNTGLST FFFFIASIVL AALNHKTGAE IAAVIFGFLA TAAYAVSTFL AVQKWRVSIR 180
  181 QQSANDYIRA RTESRDVDGR PEIQRLDT

Type	Start	End	Confidence
Cytoplasmic	1	58	0.96
Transmembrane Helix	59	76	0.95
Non-Cytoplasmic	77	84	0.77
Transmembrane Helix	85	107	0.91
Cytoplasmic	108	122	0.79
Transmembrane Helix	123	143	0.94
Non-Cytoplasmic	144	150	0.82
Transmembrane Helix	151	172	0.95
Cytoplasmic	173	208	0.98