YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109508325, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.70
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWPRDAEPEP DPESTHGPRS GRTVPGLRAL LPARAFLCSL KGRLLLAESG LSFITFVCYV  60
   61 VSSASAFLTV PLLEFLLAIY FLFADAMQLN DKWQGLCWPM MDFLRCVTAA LIYFVISITA 120
  121 VAKYSEGAYK AAGVFGFFAT IVFAIDFYLI FNEVAKFLKQ GDSGNETTAH RTEEENSNSD 180
  181 SDSD

Type	Start	End	Confidence
Cytoplasmic	1	43	0.82
Transmembrane Helix	44	63	0.70
Non-Cytoplasmic	64	64	0.35
Transmembrane Helix	65	84	0.81
Cytoplasmic	85	102	0.59
Transmembrane Helix	103	122	0.94
Non-Cytoplasmic	123	130	0.56
Transmembrane Helix	131	151	0.94
Cytoplasmic	152	184	0.73