YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|34932053, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.75
Topology Confidence:	0.51
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVNPPYTPLS GIHMHTELMR RLKSLNVFVS LFQNHNHACI ACRIIYRSDE HHPPILPPKA  60
   61 DLTIGLHGEW VSQRCEVRPE VLFLTRHFIF HDNNNTWEGH YYHYSDPVCK HPTFTIYARG 120
  121 RYSRGVLSSR VMGGTEFVFK VNHMKVTPMD AATASLLNVF SGNECGAEGS WQVGIQQDVT 180
  181 HTNGCVALGI KLPHTEYEIF KMEQDARGRY LLFNGQRPSD GSSPDRPEKR ATSYQMPLVQ 240
  241 CASSSPRAED LLEDSRAHLY GRAAGRTAGS LLLPAFVGLW TLPHWRVLR

Type	Start	End	Confidence
Cytoplasmic	1	262	0.51
Transmembrane Helix	263	284	0.66
Non-Cytoplasmic	285	289	0.66