YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	MARH3_RAT
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTSRCSHLP EVLPDCTSSA APVVKTVEDC GSLVNGQPQY VMQVSAKDGQ LLSTVVRTLA  60
   61 TQSPFNDRPM CRICHEGSSQ EDLLSPCECT GTLGTIHRSC LEHWLSSSNT SYCELCHFRF 120
  121 AVERKPRPLV EWLRNPGPQH EKRTLFGDMV CFLFITPLAT ISGWLCLRGA VDHLHFSSRL 180
  181 EAVGLIALTV ALFTIYLFWT LVSFRYHCRL YNEWRRTNQR VILLIPKSVN IPSNQQSLLG 240
  241 LHSVKRNSKE TIV

Type	Start	End	Confidence
Cytoplasmic	1	143	0.96
Transmembrane Helix	144	167	0.85
Non-Cytoplasmic	168	181	0.81
Transmembrane Helix	182	202	0.91
Cytoplasmic	203	253	0.92