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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|149064211, gi...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.93
Topology Confidence: 0.86
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRPAALLLCL TLLRCAGAGF PEDSEPISIS HGNYTKQYPV FVGHKPGRNT TQRHRLDIQM  60
   61 IMIMNRTLYI AARDHIYTVD IDTSHTEEIY CSKKLTWKSR QADVDTCRMK GKHKDECHNF 120
  121 IKVLLKKNDD TLFVCGTNAF NPSCRNYRVD TLETFGDEFS GMARCPYDAK HANIALFADG 180
  181 KLYSATVTDF LAIDAVIYRS LGDSPTLRTV KHDSKWLKEP YFVQAVDYGD YIYFFFREIA 240
  241 VEYNTMGKVV FPRVAQVCKN DMGGSQRVLE KQWTSFLKAR LNCSVPGDSH FYFNILQAVT 300
  301 DVIRINGRDV VLATFSTPYN SIPGSAVCAY DMLDIANVFT GRFKEQKSPD STWTPVPDER 360
  361 VPKPRPGCCA GSSSLEKYAT SNEFPDDTLN FIKTHPLMDE AVPSIINRPW FLRTMVRYRL 420
  421 TKIAVDNTAG PYENHTVVFL GSEKGIILKF LARIGSSGFL NGSLFLEEMN VYNPEKCSYD 480
  481 GVEDKRIMGM QLDKASGSLY VAFSTCVIKV PLGRCERHGK CKKTCIASRD PYCGWVKETG 540
  541 SCAHLSPLSR LAFEQDIERG NTDGLGDCHN SFVALNGRAS SLYPSTTTSD SASRDGHESQ 600
  601 GGMLDWNDLL KAPGNTDPLG AVSSHNHQDK KGVIRESYLK SNDQLVPVTL LAIAVILAFV 660
  661 MGAVFSGIIV YCVCDHRRKD VAVVQRKEKE LTHSRRGSMS SVTKLSGLFG DSQSKDPKPE 720
  721 AILTPLMHNG KLATPSNTAK MLIKADQHHL DLTALPTPES TPTLQQKRKP NRGSREWERN 780
  781 QNLINACTKD MPPMGSPVIP TDLPLRASPS HIPSVVVLPI TQQGYQHEYV DQPKMSEVVA 840
  841 QMALEDQAAT LEYKTIKEHL SSKSPNHGVN LVENLDSLPP KVPQREASLG PTGASLSQTG 900
  901 LSKRLEMQHS SSYGLEYKRS YPTNSLTRSH QATTLKRNNT NSSNSSHLSR NQSLGRGDNP 960
  961 PPAPQRVDSI QVHSPQPSGQ AVTVSRQPSL NAYNSLTRSG LKRTPSLKPD VPPKPSFAPL1020
 1021 STSMKPNDAC T

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle