YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109468352, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVCRGPGRML LGWAGLLVLA ALCLLQVPGA QAAACEPVRI PLCKSLPWNM TKMPNHLHHS  60
   61 TQANAILAIE QFEGLLGTHC SPDLLFFLCA MYAPICTIDF QHEPIKPCKS VCERARQGCE 120
  121 PILIKYRHSW PESLACEELP VYDRGVCISP EAIVTADGAD FPMDSSTGHC RGTSSERCKC 180
  181 KPVRATQKTY FRNNYNYVIR AKVKEVKMKC HDVTAIVEVK EILKASLVNI PRDTVNLYST 240
  241 SGCLCPPLSV NEEYVIMGYE DEERSRLLLV EGSIAEKWKD RLGKKVKRWD MKLRHLGLGK 300
  301 TDASDSTQNQ KSGRNANPRP ARS

Type	Start	End	Confidence
Signal Peptide	1	32	0.99
N-region	1	23
H-region	24	29
C-region	30	32
Cleavage Site	32	33
Non-Cytoplasmic	33	323	0.99