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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109468128, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEAAAVLPRC LQLRLLLVLL LLVLLRAGPV WPDSKVFSDL DQVRMTSEGS DCRCKCIMRP  60
   61 LSKDACSRVR SGRARVEDFY TVETLSSGAD CRCSCTAPPS SLNPCENEWK MEKLKKQAPE 120
  121 LLKLQSMVDL LEGALYSMDL MKVHAYIQKV ASQMNTLEES IKTNLSLENE VVKDSVRHLS 180
  181 EQLKSYENQS AIMMSIKKEL SNLGLQLLQR DAAAIPASAP ASSSDNKAQD TAGGQGKELN 240
  241 KYGGIQKSFS DKSLAKPPKE KLLKVEKLKK ETIKGRIPPH PTARPRALAQ QQAVIRGFTY 300
  301 YKAGRQEARQ EAPKAAADNT LKGASWLEKL PPKTEAKLPE PNSAKHDDIR LQASEGANLA 360
  361 PDFSTTTTTT TTTTTTTTTT TPTPITTPWP TEPPLHPEVP SQGREDSCEG TLRAVDPPVK 420
  421 HHSYGRHEGA WMKDPAAPDD RIYVTNYYYG NSLVEFRNLE NFKQGRWSNM YKLPYNWIGT 480
  481 GHVVYQGAFY YNRAFTKNII KYDLRQRFVA SWALLPDVVY EDTTPWKWRG HSDIDFAVDE 540
  541 SGLWVIYPAM DEHGETQHEV IVVSRLDPAD LSVHRETTWK TRLRRNSYGN CFLVCGILYT 600
  601 VDTYNQHEGQ VAYAFDTHTG TDAYPQLPFL NEYSYTTQVD YNPKERVLYA WDNGHQLTYT 660
  661 LHFVV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle