YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	TOR2A_RAT
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVARHGCPP WGSILGLLVL ALAAAAAWDV SFLRCSLGSF CECDFWPDLP GLECDLARHL  60
   61 AGQHLAKALV VKSLKAFVQD PAPSKPLVLS LHGWTGTGKS YVSSLLAQYL FRGGLRSPHV 120
  121 HHFSPIIHFP HPSHTEQYKN ELKSWVQGNL TACGRSLFLF DEMDKLPPGL MEVLKPFLGP 180
  181 SWVVYGTNYR KAIFIFISNT GGEQINQVAL EAWRSRRDRE EISLQEVEPA VSQAVLDNPH 240
  241 HGFWRSGIME EQLLDAVVPF LPLQRHHVRH CVLNELAQLG LEPREEVVQA VLDSTTYFPE 300
  301 EEQLFSSNGC KTVASRITFF L

Type	Start	End	Confidence
Signal Peptide	1	26	0.98
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	321	0.99