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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|34852993, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEAEGVAVSV AAAAAATTTI VATDDCDSRP GQELVVAWNT VSTGLVPPAA LGLASSRTSG  60
   61 AVPPKEEELR AAVEVLRAHG LHSVLEEWFV EVLQNDLQGN IATEFWNAIS LRENSVDEPQ 120
  121 CLVLLLDAFG LLESRLDPYL HSLELLEKWT RLGLLMGAGA QGLREKVHTM LRGVLFFSTP 180
  181 RTFQEMVQRL YGRFLRVYMQ SKRKGEGGTD PELEGELDSR YARRRYYRLL QSPLCAGCGS 240
  241 DKQQCWCRQA LEQFNQLSQV LHRLSLLERV SAEAVTTTLH QVTRERMEDR CRGEYERSFL 300
  301 REFHKWIERV VGWLGKVFLQ DNPSRPTSPE AGNTLRRWRC HVQRFFYRIY ASLRIEELFS 360
  361 IIRDFPDSRP AIEDLKYCLE RTDQRQQLLV SLKVALETRL LHPGVNTCDI ITLYISAIKA 420
  421 LRVLDPSMVI LEVACEPIRR YLRTREDTVR QIVAGLTGDS DGTGDLAVEL SKTDPACLET 480
  481 GQDSEDDSGE PEDWVPDPVD ADPAKSSSKR RSSDIISLLV SIYGSKDLFI NEYRSLLADR 540
  541 LLHQFSFSPE REIRNVELLK LRFGEAPMHF CEVMLKDMAD SRRINANIRE EDEKRPVEEQ 600
  601 PPFGVYAVIL SSEFWPPFKD EKLEVPEDIR AALDVYCKKY EKLKAMRTLS WKHTLGLVTM 660
  661 DVELADRTLS VAVTPVQAVV LLYFQDQASW TLEELSKVVK MPVALLRRRM SVWLQQGVLR 720
  721 EEPPGTFSVI EEERPQDRDN MVLIDSDDES DSGMASQADQ KEEELLLFWT YIQAMLTNLE 780
  781 SLSLERIYSM LRMFVMTGPA LAEIDLQELQ GYLQKKVRDQ QLIYSAGVYR LPKNCN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle