YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|149044979, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAAAAPGAL GALSAGRVRL VAACCARLGS AAWARGTAPR RGYSSEVKTE DELRVRHLEE  60
   61 ENRGIVVLGI NRAYGKNSLS KNLLKMLSKA VDALKSDKKV RTIIIRSEVP GIFCAGADLK 120
  121 ERAKMHSSEV GPFVSKIRAV INDIANLPVP TIAAIDGLAL GGGLELALAC DIRVAASSAK 180
  181 MGLVETKLAI IPGGGGTQRL PRAIGMALAK ELIFSARVLD GQEAKAVGLI SHVLEQNQEG 240
  241 DAAYRKALDL AREFLPQGPV AMRVAKLAIN QGMEVDLVTG LAIEEACYAQ TISTKDRLEG 300
  301 LLAFKEKRPP RYKGE

Type	Start	End	Confidence
Signal Peptide	1	23	0.95
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	315	0.98