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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|34861025, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.69
Topology Confidence: 0.69
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MILGGNTGPV GRLKLVTLLF ALSPELVFLG AGLKLKENGY DGLLVAINPR VPEDLKLIRN  60
   61 IQEMITEASF YLFNATKRRV FFRSVQILIP ATWTAHNYSR VKQESFDKAN VLVTEQNGVP 120
  121 GEDPYTLQHR GCGQEGKYIH FTPNFLLNDE LAAGYGSRGR VFVHEWAHLR WGVFDEYNSD 180
  181 KPFYVNGRNE IQVTRCSSDI TGVFVCEKGL CPHEDCIISK LFREGCTFLY NSTQSATGSI 240
  241 MFMQSLPSVV EFCNEGTHNR EAPNLQNRVC SLRSTWDVIT GSSDLNHSLP VLGVELPAPP 300
  301 SFSLLQAGDR VVCLVIDVSR KMAEGDRLLR LQQAAELFLM QVVEAHTFVG IVTFDSKGEI 360
  361 RAPLQQINSD DDRKLLVSYL PTTVSTEAET NICAGVKKGF EVVEKQNGRA DGSVMILVTS 420
  421 GADEHITNCL LTAMSSGSTI HSMALGSSAA RRLGELSHVT GGLEFFIPDP FTSSRMTEAF 480
  481 SGISSGAGDI FQQSLQLEST CETVQPQHQL ANTVTVDRAV GNDTFFLVMW QTGGPSEIVL 540
  541 LDPSGRKYNT GDFIINLPFR TASLKIPGTA KHGHWTYTLN NTHHSPQALK VTVASRASSL 600
  601 AVSPATVDAF VERDSTYFPQ PVIIYANVRK GLYPILNATV MATVEPEAGD PVVLQLLDEG 660
  661 AGADVIKNDG IYSRYFFSFA VSGRYSLTVH VRHSPSTSTL AHSVPGNHAM YVPGYVTNDN 720
  721 IQMNAPKRTG RRPVKERWDF SRVSSGGSFS VLGVPDGPHP DVFPPCRITD LAAMNVEEDV 780
  781 TLSWTAPGED FDQGQTTSYE IRMSKSLQRI RDDFDNAILV NSSGLIPQHA GTRETFTFSP 840
  841 KLVTHELEHE PDEEAQETYI VYVALRAMDR SSLRSAVSNI VLVSMSLPPN SAPVVSRDDR 900
  901 ILKGVLTIVG LITILCLLLV VSHCTLNRKK RASRKENETK FL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle