YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|71051817, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.68
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLPSRRKAAQ LPWEDGRARL LPGGLRRKCS IFHLFIAFLL LVFFSLLWLQ LSCSGDVAQV  60
   61 TRGQGQETSG PPRACPPEPP PEHWEEDESW GPHRLAVLVP FRERFEELLV FVPHMHRFLS 120
  121 RKKIQHHIYV LNQVDHFRFN RAALINVGFL ESSNSTDYIA MHDVDLLPLN EELDYGFPEA 180
  181 GPFHVASPEL HPLYHYKTYV GGILLLSKQH YQLCNGMSNR FWGWGREDDE FYRRIKGAGL 240
  241 QLFRPLGITT GYQTFRHLHD PAWRKRDQKR IAAQKQEQFK VDREGGLNTV RYRVDSRTAL 300
  301 SVGGAPCTVL NVMLDCDKTA TPWCTFG

Type	Start	End	Confidence
Signal Peptide	1	55	0.68
N-region	1	46
H-region	47	52
C-region	53	55
Cleavage Site	55	56
Non-Cytoplasmic	56	327	0.99