YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	RM09_RAT
Protein type:	Globular with Signal Peptide
Type Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAASMAPRCS SLLWAGAAWL RQRGIGELLQ PRIERSTPGR DFSLSHYQST VIVERWWKVP  60
   61 LAGEGRKPRL HRRHRVYKLV EDTKHRPKDH LELILTQSVD EIGVRGDLVS VKKSVGRNKL 120
  121 LPQGLAVYAS PENRKLFEEE KLLRQEGKLE KIQTKAGEAT VKFLRSCRLE VGMKNNVKWE 180
  181 LNPEIVARHF FKNLGVVVAP HALRLPEDPI TRWGEYWCDV TVNGLDTVRV PMSVVLFRKP 240
  241 KTKRYKHWLA QQAAKITSPE AV

Type	Start	End	Confidence
Signal Peptide	1	20	0.88
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	262	0.99