YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	RM24_RAT
Protein type:	Globular with Signal Peptide
Type Confidence:	0.94
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLSALLALA SKATLSPHYR YGMSRPGSIA DKRKNPPWSR RRPVVVEPIS DEDWHLFCGD  60
   61 MVEILEGKDA GKQGKVVQVV RQRNWVVLEG LNTHYRYIGR TKDHRGTMIP SEAPLLHHQV 120
  121 KLVDPVDRKP TEIQWRFTEA GERVRVSTRS GRIIPKPEFP RADGIVPETW TDGPKDTSVE 180
  181 DALERTYVPR LKTLEEDVME AMGIQETRRF KKIYWY

Type	Start	End	Confidence
Signal Peptide	1	16	0.91
N-region	1	7
H-region	8	13
C-region	14	16
Cleavage Site	16	17
Non-Cytoplasmic	17	216	0.99