YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|149048662, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.66
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAATSLVGIC RRASAFLKAA CSLVNPKTPA HSGCRPPLSL LHKNTPHATS FLQCKFLHTT  60
   61 LSRKGLEEFF DDPKNWGEEK VKSGASWTCQ QLRNKSNEDL HKLWYVLLKE RNMLLTLEQE 120
  121 AKRQRLPMPS PERLEKVVDS MDALDKVVQE REDALRLLQT GQEKPRPGAW RQDIFGRIVW 180
  181 HKFKQWPIPW YLNKRYNRRR FFAMPYVDSF IRLRIEKHAR TEARKRSLQK KKEKILQAKF 240
  241 PHLSQDRKSS TV

Type	Start	End	Confidence
Signal Peptide	1	15	0.66
N-region	1	6
H-region	7	12
C-region	13	15
Cleavage Site	15	16
Non-Cytoplasmic	16	252	0.97