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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|34854327, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.79
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLRTPGLPR RSGMASGVTI TLAIAIFALE INAQAPEPTP REEPSADALL PIDCRMSTWS  60
   61 QWSQCDPCLK QRFRSRSIEV FGQFQGKSCA DALGDRQHCE PTQECEEVQE NCGNDFQCET 120
  121 GRCIKRKLLC NGDNDCGDFS DESDCESDPR LPCRDRVVEE SELGRTAGYG INILGMDPLG 180
  181 TPFDNEFYNG LCDRVRDGNT LTYYRKPWNV AFLAYETKAD KNFRTENYEE QFEMFKTIVR 240
  241 DRTTSFNANL ALKFTITEAP IKKVGVDEVS PEKNSSKPKD SSVDFQFSYF KKENFQRLSS 300
  301 YLSQTKKMFL HVRGMIQLGR FVMRNRGVML TTTFLDDVKA LPVSYEKGEY FGFLETYGTH 360
  361 YSSSGSLGGL YELIYVLDKA SMKEKGVELS DVKRCLGFNL DVSLYTPLQT TLEGPSLTAN 420
  421 VNHSDCLKTG DGKVVNISRD HIIDDVISFI RGGTRKQAVL LKEKLLRGAK TIDVNDFINW 480
  481 ASSLDDAPAL ISQKLSPIYN LIPLTMKDAY AKKQNMEKAI EDYVNEFSAR KCYPCQNGGT 540
  541 AILLDGQCMC SCTIKFKGIA CEISKQR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle