YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|34874262, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.92
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVREQYTTVT EGTHIERPEN QHVYKIGIYG WRKRCLYLFV LILLTILVVN LALTIWILRV  60
   61 MWFSPIGMGH LHVTADGLRL EGESEFLFPL YAKEIRSRVD SSLLLQSTQN VTVNARNSEG 120
  121 EVTGRVKVGA QMVEVQSQHL QISSEDGKPL FTAEEQGVVV GTGRLRVTGP EGALFEHSVE 180
  181 TPLVRAEHPF QDLRLESPTR SLSMDAPRGV HIEARAGKME ALSQMDIVLQ SSDGVLVLDA 240
  241 ETVGLAKLKQ GTQGPPGSSN GVYEICACPD GKLYLSMAGE ATTCEEHSHI CL

Type	Start	End	Confidence
Cytoplasmic	1	34	0.95
Transmembrane Helix	35	58	0.92
Non-Cytoplasmic	59	292	0.93