YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|71361661, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.78
Topology Confidence:	0.49
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDMEKYLFPF SLLILVLGWV HLYLGGESRE SSADKFKRQH MDTEGPSKSS PTYCNQMMKR  60
   61 QGMTKGSCKP VNTFVHEPLE DVQAICSQGQ VTCKNGRNNC HKSSSTLRIT DCRLKGSSKY 120
  121 PNCDYTTTDS QKHIIIACDG NPYVPVHFDA SV

Type	Start	End	Confidence
Cytoplasmic	1	5	0.49
Transmembrane Helix	6	25	0.73
Non-Cytoplasmic	26	152	0.72