YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|27674093
Protein type:	Transmembrane
Type Confidence:	0.96
Topology Confidence:	0.58
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRVAGLIRVV AFIFTVVTMW IFLRSYTNFN RKTIRLPRWL GMPPKETHTP KFKCGLSKSC  60
   61 LNNFFAFKIS SGAANVVGPS MCFEDEIIMS PVRNNVGRGL NIALVNGTTG RVIRKASFDM 120
  121 YSGEPQPLLD FLTEIPDSTL VLVASYDDPG TKMNDKIKTL FTNLGSSYAK QLGFRDSWVF 180
  181 VGAKDLRSKS PYEQFLKNNP ETNKYEGWPE LLELEGCVPK KVM

Type	Start	End	Confidence
Cytoplasmic	1	5	0.58
Transmembrane Helix	6	26	0.86
Non-Cytoplasmic	27	223	0.68