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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|34863146, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMWPPPPTFS VFLLLLLSQV PSSRPQSPGT KKLRLVGPAN RPEEGRLEVL HQGQWGTVCD  60
   61 DDFALQEATV ACRQLGFESA LTWAHSAKFG QGEGPIWLDN VRCLGTEDTL DQCGSNGWGV 120
  121 SDCRHSEDVG VVCHPRRQQG YHSEKVSNAL GPQGRRLEEV RLKPILASAK RHSPVTEGAV 180
  181 EVRYEGHWRQ VCDQGWTMNN SRVVCGMLGF PSQAPVNSHY YRKVWNLKMK DPKSRLNGLT 240
  241 KKNSFWIHRV DCLGTEPHLA KCQVQVAPGR GKLRPACPGG MHAVVNCVAG PHFQRQKPKP 300
  301 KRKESGAEQE LKVRLRSGAQ VGEGRVEVLM NRQWGTVCDH RWNLISASVV CRQLGFGSAR 360
  361 EALFGAQLGQ GLGPIHLSEV RCRGYEQTIG DCLALEGSQN GCQHANDAAV RCNIPDMGFQ 420
  421 NKVRLAGGRN SEEGVVEVQV EVNGVPRWGT VCSDHWGLTE AMVTCRQLGL GFANFAIKDT 480
  481 WYWQGTPEAK EVVMSGVRCS GTEMALQQCQ RHGPVHCSHG SGRFSAGVAC MNSAPDLVMN 540
  541 AQLVQETAYL EDRPLSMLYC AHEENCLSKS ADHMDWPYGH RRLLRFSSQI YNLGRADFRP 600
  601 KAGRHSWIWH QCHRHYHSIE VFTHYDLLTL NGSKVAEGHK ASFCLEDTNC PSGVQRRYAC 660
  661 ANFGEQGVAV GCWDTYRHDI DCQWVDITDV SPGDYIFQVV VNPTNDVAES DFSNNMIRCR 720
  721 CKYDGQRVWL HNCHTGDPYR PNAELSLEQE QRLRNNLI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle