YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|32527721, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.70
Topology Confidence:	0.55
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKDEGLHSRL HSISKPPPDP LSDCLPPAWG SGCQDVSFQP HASSHDDHRL TNPNSRTPFF  60
   61 SLSAGLGLLA LFSSALVRLP VTADPMGFGD LKTPAGLQVL NDYLADKSYI EGEKASLPGV 120
  121 KKSLGKYGPA SVADTTGSGA ADAKDDDDID LFGSDVEEES EDAKRLREER LARYESKKAK 180
  181 MPAVVAKSSI SLDVKPWDDE TDMTKLEECV RSIQVDGLLE RLKEEEEEEE EEEEEEEEEE 240
  241 EEEEEEEEEE EEL

Type	Start	End	Confidence
Cytoplasmic	1	57	0.55
Transmembrane Helix	58	77	0.65
Non-Cytoplasmic	78	253	0.84