YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109463121, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDANRPGAFV LSSAPLAALH NMAEMKTSLF PYALQGPAGF KTPALGSLGA QLPLGTPHGI  60
   61 SDILGRPVGA AGGGLLGSLP RLNGLASSAG VYFGPAAAVA RGYPKPLAEL PGRPPIFWPG 120
  121 VVQGSPWRDP RLAGSAQAGG VLDKDGKKKH SRPTFSGQQI FALEKTFEQT KYLAGPERAR 180
  181 LAYSLGMTES QVKVWFQNRR TKWRKRHAAE MASAKKKQDS DAEKLKVGGS DAEDDDEYNR 240
  241 PLDPNSDDEK ITRLLKKHKP SNLALVSPCG GSAGDAL

Type	Start	End	Confidence
Signal Peptide	1	23	0.78
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	277	0.98