YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|34877269, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAAAAAAAA TEQQGSNGPV KKSMREKAVE RRNVNKEHNS NFKAGYIPID EDRLHKTGLR  60
   61 GRKGNLAICV IVLLFILAVI NLLITLVIWA VIRIGPNGCD SLEFHESGLL RFKQVSDMGI 120
  121 IHPLYKSTVG GRRNENLVIT GNNQPIVFQQ GTTKLSVEKN KTSITSDIGM QFFDPRTQNI 180
  181 LFSTDYETHE FHLPSGVKSL NVQKASTERI TSNATSDLNI KVDGRAIVRG NEGVFIMGKT 240
  241 IEFHMRGDVE LKAENSIILN GTVMVSPTRL PSSSGGDQSG SGDWVRYKLC MCADGTLFKV 300
  301 QVTSHNMGCQ VSDNPCGNTH

Type	Start	End	Confidence
Cytoplasmic	1	65	0.98
Transmembrane Helix	66	92	0.88
Non-Cytoplasmic	93	320	0.98