YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|27693891, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.96
Topology Confidence:	0.80
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEERLRARSK NPPPFCLGGP EKELRQLQDM ALRVPIAVCL LFKAMKAALS EETEAVPPST  60
   61 TTQQSDWTLN ITEADYIEEP VALKFSHPCL EDHNSYCING ACAFHHELKK AICRCFTGYT 120
  121 GERCEHLTLT SYAVDSYEKY IAIGIGVGLL ISAFLAVFYC YVRKRCLNVK SPYIICSGGR 180
  181 PL

Type	Start	End	Confidence
Non-Cytoplasmic	1	139	0.80
Transmembrane Helix	140	162	0.90
Cytoplasmic	163	182	0.82