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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|157821391, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.67
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARPVQSFQL WSALGFLLQL AIFLGKLGPQ VQSVRPESLL FVSTLDGSLH ALNKQTGDLK  60
   61 WTVKDDPIIQ GPMYVTEMAF LSDPADGSLY ILGTQKQQGL MKLPFTIPEL VHASPCRSSD 120
  121 GVFYTGRKQD AWFVVDPESG ETQMTLTTEG FSTPQLYIGR TQYTVSMHDP RTPTLRWNTT 180
  181 YRRYSAPPVD GSPGKYMSHL TSCGMGLLLT VDPGSGTVLW TQDLGVPVTG IYTWHQDGLR 240
  241 QLPHLTLARD TLHFLVLRWG HIRLPASSSQ DTVTQFSSLD TELLMTLYVG KEEAGFYVSK 300
  301 ALVHAGVALV PRGLTLAPMD GPTTDEVTVQ VSGEREGSPS TAVRYPSGSV ALPSQWLLIG 360
  361 YHEPPPVLHT TMLRVQRTPG KGSADTRDSD DLHAPALSFE FLNLKREEPW DPELHPEEKA 420
  421 DTYPGLGSQD LLAASFTAIL LGAWVLYLMR QQQQSPSAPA GPSDLPQDTQ VQLSRDTLQN 480
  481 QRRFQSPPEP VQPAHDPEAE QPTVVGKISF NPKDVLGRGA GGTFVFRGQF EGRAVAVKRL 540
  541 LRECFSLVQR EVQLLQESDR HPNVLRYFCT EQGPQFHYIA LELCQASLQE YVESPDLDRW 600
  601 GLGPTMVLQQ MMSGLAHLHS LHIVHRDLKP GNILMAGPDS QGQGRVVISD FGLCKKLPAG 660
  661 RCSFSLHSGI PGTEGWMAPE LLQLPPDSPT SAVDIFSAGC VFYYVLSGGS HPFGESLYRQ 720
  721 ANILSGDHCL AQLQEETHDK VVALDLVKAM LSLLPQDRPS AGWVLAHPLF WSRAKELQFF 780
  781 QDVSDWLEKE PEQGPLVTAL EAGSYKVVRE NWYKHISAPL QEDLKRFRSY KGTSVRDLLR 840
  841 AMRNKKHHYR ELPTEVRQTL GQLPAGFAQY FTQRFPRLLL HTHRAMRTCA SESLFLPYYP 900
  901 AALEARGSCQ VPQRAETPRG PKGRPRS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle