YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	TFB2M_RAT
Protein type:	Globular with Signal Peptide
Type Confidence:	0.96
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRGLAMRLPP RLALSVLAGR GPSCILGSGA ATRKDWQERN RRSFSDLYTQ PLPDCDFEES  60
   61 SSWTHKSRSE PTRHIACKKS ARNLVRDLLE HQNPSHQLIL ECNPGPGILT GALLKAGARV 120
  121 VAFESEKMFI PHLESLRKNA DGELQVVHCD FFKIDPRYQE LVRPDVNSHT IFQNLGIKAV 180
  181 PWSAGVPIKV FGILPNKHER RLLWKILFDL YSCESIYRYG RVELNMFISE KEFRKLIATP 240
  241 KRPDLYQVLG VLWQVACEIK FLHMEPWSSF SVHAENGHLE KSKHSESLNL LKQNLYLVRM 300
  301 TPRRTLFTEN LSPLNYDMFF HLVKHCFGKR NAPIIHHLRS LSTVDPINIL RQIRKRPGDT 360
  361 AAKMYPHDFK RLFETIERSE DSVFKWIYDY CSDDSEL

Type	Start	End	Confidence
Signal Peptide	1	29	0.93
N-region	1	20
H-region	21	26
C-region	27	29
Cleavage Site	29	30
Non-Cytoplasmic	30	397	0.99