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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109497830, gi...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.98
Topology Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELPWTALFL STVLLGLSCQ GSDWESDRNF ISAAGPLTND LVLNLNYPPG KQGSDVVSGN  60
   61 TDIYICQQPL PSFLSQYFSS LRASQVTHYK VLLSWAQLLP TGSSKNPDQE AVQCYRQLLQ 120
  121 SLKDAQLEPM VVLCHQTPPT SSAIQREGAF ADLFADYATL AFQSFGDLVE IWFTFSDLEK 180
  181 VIMDLPHKDL KASALQTLSN AHRRAFDIYH RKFSSQGGKL SVVLKAEDIP ELLPDPALAA 240
  241 LVQGSVDFLS LDLSYECQSV ATLPQKLSEL QNLEPKVKVF IYTLKLEDCP ATGTSPSSLL 300
  301 ISLLEAINKD QIQTVGFDVN AFLSCTSNSE ESPSCSLTDS LALQTEQQQE TAVPSSPGSA 360
  361 YQRVWAAFAN QSREERDAFL QDVFPEGFLW GISTGAFNVE GGWAEGGRGP SIWDHYGNLN 420
  421 AAEGQATAKV ASDSYHKPAS DVALLRGIRA QVYKFSISWS RLFPTGQKST PNRQGVAYYN 480
  481 KLIDRLLDSH IEPMATLFHW DLPQALQEQG GWQNESVVEA FLDYAAFCFS TFGDRVKLWV 540
  541 TFHEPWVMSY AGYGTGQHAP AISDPGMASF KVAHLILKAH ARTWHLYDLH HRLQQQGRVG 600
  601 IVLNSDWAEP LDRKSPQDLA AAERFLHFML GWFAHPIFVD GDYPTTLRAQ IQHINQQCGH 660
  661 PLAQLPEFTE AEKRLLKGSA DFLGLSHYTS RLISKAGRQT CTSSYDNIGG FSQHVDPEWP 720
  721 QTASPWIRVV PWGIRRLLRF ASMEYTKGKL PIFLAGNGMP VGEEADLFDD SVRVNYFNLY 780
  781 INEVLKAVKE DLVDVRSYIV RSLIDGYEGP LGFSQRFGLY HVNFNDSSRP RTPRKSAYFF 840
  841 TSIIEKNGFS AKKVKRNPLP VRADFTSRAR VTDSLPSEVP SKAKIVWEKF SKQPRFERDL 900
  901 FYHGTFRDDF LWGVSSSAYQ IEGGWNADGK GPSIWDNFTH TPGNGVKDNA TGDVACDSYH 960
  961 QLDADLNILR TLKVKSYRFS ISWSRIFPTG RNSTINKQGV DYYNRLIDSL VDNNIFPMVT1020
 1021 LFHWDLPQAL QDIGGWENPS LIELFDSYAD FCFKTFGDRV KFWMTFNEPW CHVVLGYSSG1080
 1081 IFPPSVQEPG WLPYKVSHIV IKAHARVYHT YDEKYRSEQK GVISLSLNTH WAEPKDPGLQ1140
 1141 RDVEAADRML QFTMGWFAHP IFKNGDYPDV MKWTVGNRSE LQHLASSRLP TFTEEEKNYV1200
 1201 RGTADVFCIN TYTSVFVQHS TPRLNPPSYD DDMELKLIEM NSSTGVMHPD VPWGTRRLLN1260
 1261 WIKEEYGNIP IYITENGQGL ENPTLDDTER IFYHKTYINE ALKAYKLDGV DLRGYSAWTL1320
 1321 MDDFEWLLGY TMRFGLYHVD FNHVSRPRTA RASARYYAEV IANNGMPLAR EDEFLYGEFP1380
 1381 KGFIWSAASA SYQVEGAWRA DGKGLSIWDT FSHTPLRIGN DDNGDVACDS YHKIAEDVVA1440
 1441 LQNLGVSHYR FSIAWSRILP DGTTKFINEA GLSYYVRFID ALLAAGITPQ VTIYHWDLPQ1500
 1501 ALQDVGGWEN ETIVQRFKEY ADVLFQRLGD RVKFWITLNE PFVIAAQGYG TGVSAPGISF1560
 1561 RPGTAPYIAG HNLIKAHAEA WHLYNDVYRA RQGGTISITI SSDWAEPRDP TNQGDVEAAR1620
 1621 RYVQFMGGWF AHPIFKNGDY PEVMKTRIRD RSLAAGLNKS RLPEFTESEK SRIKGTFDFF1680
 1681 GFNHYTTVLA YNLDYPAAFS SFDADRGVAS IADSSWPVSG SFWLKVTPFG FRRILNWLKE1740
 1741 EYNNPPIYVT ENGVSRRGEP ELNDTDRIYY LRSYINEALK AVQDKVDLRG YTVWSIMDNF1800
 1801 EWATGFAERF GVHFVNRSDP SLPRIPKASA KFYATIVRCN GFPDPAQGPH PCLQQPEDAA1860
 1861 PTASPVQSEV PFLGLMLGIA EAQTALYVLF ALLLLGACSL AFLTYKYCRR SKQGNAQPSQ1920
 1921 HQLSPISSF

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