YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|34855658, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.68
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFIKGRTAKA PRGEPRRSSR RGQKLAVVAP PPALGSTSRP HFRRESIARR RCRKSGRLFA  60
   61 ASRKMAAAAA TVNGTTGVSS SGPAATSGGI LQAAAGMYEQ LKDEWNRKSP NLSKCGEELG 120
  121 RLKLVLLELN FLPTTGTKLT KQQLILARDI LEIGAQWSIL CKDIPSFERY MAQLKCYYFD 180
  181 YKEQLPESAY MHQLLGLNLL FLLSQNRVAE FHTELERLPA KDIQTNVYIK HPVSLEQYLM 240
  241 EGSYNKVFLA KGNIPAESYT FFIDILLDTI RDEIAGCIEK AYEKILFAEA TRILFFSTPK 300
  301 KMTDYAKKRG WLLGPNNYYS FASQQQKPED STIPSTELAR QVIEYARQLE MIV

Type	Start	End	Confidence
Signal Peptide	1	35	0.69
N-region	1	26
H-region	27	32
C-region	33	35
Cleavage Site	35	36
Non-Cytoplasmic	36	353	0.97