YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	APOC4_RAT
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLLRCRQQT LPSLCLSVLF LACFVASMPT ESLTPTPGPE NSRWSLVRAR VMEMVEPLVT  60
   61 RTRDRWRWFW GPRAIQGFVQ TYYEDHLKDL GPRTQAWLQS SRDHLLNKTH SLCPRLLCRD 120
  121 WTQG

Type	Start	End	Confidence
Signal Peptide	1	32	0.96
N-region	1	23
H-region	24	29
C-region	30	32
Cleavage Site	32	33
Non-Cytoplasmic	33	124	0.99