YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|158631258, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.68
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLLAAAGLV AFVLLLYMVS PLISPKPLAL PGAHVVVTGG SSGIGKCIAI ECYKQGAFIT  60
   61 LVARNEDKLL QAKKEIEKYS INDKQVVLCI SVDVSQDYNQ VENVIKQAQE KLGPVDMLVN 120
  121 CAGTSKSGKF EELEVSSFEK LMSINYLGSV YPSRAVITTM KERRVGRIVF VSSQAGQLGL 180
  181 FGFTAYSSSK FAIRGLAEAL QMEVKPYNVY VTVAYPPDTD TPGLAEENKT KPLETRLISE 240
  241 TTAVCKPEQV AKQIVKDAIQ GNFNSSIGSD GYMLSSLTCG MAPVTSITEG LQQVVTMGLF 300
  301 RTIALFYLGS FDNIIRRCMV QKRKPEVGDK TA

Type	Start	End	Confidence
Signal Peptide	1	21	0.99
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	332	0.94