YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|34854062, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLWALALLAL GIGPRAYAGD HGEDTAFDLF SISNINRKTI GAKQFRGPDP GVPAYRFVRF  60
   61 DYVPPVNTDD LNRIVKLARR KEGFFLTAQL KQDRKSRGTL LVLEGPGTSQ RQFEIVSNGP 120
  121 GDTLDLNYWV EGHQHTNFLE DVGLADSQWK NVTVQVASDT YSLYVGCDLI DSVTLEEPFY 180
  181 EQLEADKSRM YVAKGASRES HFRGLLQNVH LVFADSVEDI LSKKGCQHSQ GAEVNTISEH 240
  241 TETLHLSPHI TTDLVVQGVE KAQEVCTHSC EELSNMMNEL SGLHVMVNQL SKNLERVSSD 300
  301 NQFLLELIGG PLKTRNMSAC VQEGRIFAEN ETWVVDSCTT CTCKKFKTVC NQITCSPATC 360
  361 ANPSLVEGEC CPSCSHSADN DEGWSPWAEW TECSVTCGSG TQQRGRSCDV TSNTCLGPSI 420
  421 QTRTCSLGKC DTRIRQNGGW SHWSPWSSCS VTCGVGNVTR IRLCNSPVPQ MGGKNCKGSG 480
  481 RETKACQRAP CPIDGRWSPW SPWSACTVTC AGGIRERTRV CNSPEPQYGG KDCVGDVTEH 540
  541 QMCNKRSCPI DGCLSNPCFP GAKCNSFPDG SWSCGSCPVG FLGNGTHCED LDECAVVADI 600
  601 CFSINKASRC VNTNPGFHCL PCPPRYKGTQ PFGIGLEDAK TEKQVCEPEN PCKDKTHNCH 660
  661 KHAECIYLGH FSDPMYKCEC QTGYAGDGLI CGEDSDLDGW PNSNLVCATN ATYHCVKDNC 720
  721 PKLPNSGQED FDKDGIGDAC DEDDDNDGVS DEKDNCPLLF NPRQLDYDKD EVGDRCDNCP 780
  781 YVHNQAQIDT DNNGEGDACS VDIDGDDVFN ERDNCPYVYN TDQRDTDGDG VGDHCDNCPL 840
  841 MHNPDQMDQD NDLVGDQCDN NEDIDDDGHQ NNQDNCPYIS NSNQADHDND GKGDACDSDD 900
  901 DNDGVPDDRD NCRLVFNPDQ EDSDGDGRGD ICKDDFDNDN VPDIDDVCPE NNAITETDFR 960
  961 NFQMVPLDPK GTTQIDPNWV IRHQGKELVQ TANSDPGIAV GFDEFGSVDF SGTFYVNTDR1020
 1021 DDDYAGFVFG YQSSSRFYVV MWKQVTQTYW EDKPSRAYGY SGVSLKVVNS TTGTGEHLRN1080
 1081 ALWHTGNTEG QVRTLWHDPK NIGWKDYTAY RWHLIHRPKT GYMRVLVHEG KQVMADSGPI1140
 1141 YDQTYAGGRL GLFVFSQEMV YFSDLKYECR DA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle