YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|82658464, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASMGLQVLG ISLAVLGWLG VILSCSLPMW RVTAFIGSNI VTAQTSWEGL WMNCVVQSTG  60
   61 QMQCKMYDSM LALPQDLQAA RALMVISIIV GALGMLLSVV GGKCTNCMED ETVKAKVMIT 120
  121 AGAVFIVASM LIMVPVSWTA HNVIRDFYNP LVASGQKREM GASLYIGWAA SGLLLLGGGL 180
  181 LCCNCPPRRN EKPYSAKYSA ARSVPASNYV

Type	Start	End	Confidence
Cytoplasmic	1	7	0.86
Transmembrane Helix	8	30	0.89
Non-Cytoplasmic	31	78	0.91
Transmembrane Helix	79	101	0.91
Cytoplasmic	102	116	0.88
Transmembrane Helix	117	140	0.88
Non-Cytoplasmic	141	163	0.92
Transmembrane Helix	164	185	0.92
Cytoplasmic	186	210	0.97