YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109496327, gi...
Protein type:	Transmembrane
Type Confidence:	0.94
Topology Confidence:	0.29
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSESKETGKQ QLGPLDEELL TSSHTRYSMK GFGFQPNSGF SSFTGYLVHS HVPLALKALF  60
   61 LTVFSVLLVV ILVKVYKIPS SHEQEESNQK NFYQELIQLK AGVDRLCRSC PWDWTAFQGN 120
  121 CYFFSVAQKS WNDSATACHN VGAQLVVIKS EEEQNFLQKT SKKRGYTWMG LIDINKESTW 180
  181 HWVDGSPLTL TFMKYWNKGE PNNVGDKDCA EFREDGWNDT KCDNKKFWIC KKPETSCSSK 240
  241

Type	Start	End	Confidence
Cytoplasmic	1	31	0.62
Transmembrane Helix	32	48	0.29
Non-Cytoplasmic	49	53	0.43
Transmembrane Helix	54	76	0.82
Cytoplasmic	77	240	0.55