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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|26349013
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFRCWSAILI LGFIFLASEG RPTKESGYGL KSYQPLTRLR HKQEKSQESS RIKEFLIHDG  60
   61 PFGSCENKYC GLGRHCVINR ETRHAECACM DLCKQHYKPV CGSDGEFYEN HCEVHRAACL 120
  121 KKQKITIVHN EDCFFEGDNC MAIEYSKMKS MLLDLQNQKY ITQENENPNS DDISRKKPLV 180
  181 DQRFKYFDAD SNGLVDINEL TQVIKQEELN KDLSDCTLYD LLKYDDFNAD KHLALEEFYR 240
  241 AFQVIQLSLP EDQRVSITAA TVGQSAVLSC AIVGTLRPPI IWKRNNIVLN NLDLEDINDF 300
  301 GDDGSLYITK VTTVHMGNYT CYADGYENVR QTHIFQVNVP PVIRVYPESQ AREPGVTASL 360
  361 RCHAEGIPDP QLGWLKNGID ITPKLSKQLT LQANGSEVHI SNVRYEDTGA YTCIARNEAG 420
  421 VDEDISSLFV EDSARKTLAN ILWREEGLGI GNMFYVFYED GIKVIQPTEC EFQRHIKPSE 480
  481 KLLGYQDEVC PKAEEDEVQR CVWASAVNVK DKFIYVAQPT LDRILIVDVQ SQKVVQAVST 540
  541 DPVPVKLHYD KSHDQVWVLS WGSMEKTSPT LQVITLASGN VPHHTIHTQP VGKQFDRVDD 600
  601 FFIPTPTLII THMRFGFILH KDESALHKID LETMSYIKTI NLKDSRCIPL SLAYTHLGGY 660
  661 YFISCKADIT GATPPQLVVD SVTDSIIGFN SDVTGTPYVS PDGHYLVSVN DVKGLVRVQY 720
  721 ITIRGEILDA FDIHTNLHIS DLAFQPSFTE AHQYNIYGSS SQQTDVLFVE LSSGKVKMIK 780
  781 SLKEPLKTED WPWSQKNRHI QGSGLFGQYL MTPSKDSLFI LDGRLNKLNC EITEVQKGNT 840
  841 VVWVGDA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle