YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|44921643, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLVSWDHPKM LPRLLGFLAL SLLACGNPTI VSRKEWGASS LTCRVPLSLP VPYLIIEQVT  60
   61 RMQCQDQITC SQVVRVLQSQ YVHNKGWCDI AFNFLVGDDG KVYEGVGWYV QGLHTQGYNN 120
  121 VSLGIAFFGS KIGSPSPAAL SATEDLIFSA IQNGHLSPKY TQPFLLKEET CLVPQHSEIP 180
  181 KKACPNITPR SAWEARETHC PQMNLPAKFV IIIHTAGKSC NESADCLVRV RGTQSFHIDN 240
  241 QDFCDIAYHF LVGQDGEVYE GVGWNIEGSH TYGYNDIALG IAFMGNFVEK PPNEASLKAA 300
  301 QSLIQCAVAK GYLTSNYLLM GHSDVSNILS PGQALYNIIK TWPHFKH

Type	Start	End	Confidence
Signal Peptide	1	32	0.92
N-region	1	23
H-region	24	29
C-region	30	32
Cleavage Site	32	33
Non-Cytoplasmic	33	347	0.99