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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|15809000, gi|...
Protein type: Transmembrane
Type Confidence: 0.78
Topology Confidence: 0.60
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKSKSYYLC TSLSTPALGA GGSGSASGTV GGKGGAGVAG LPPPPWAETT WIYHDGEDTK  60
   61 MIVGEEKKFL LPFWLQVIFI SLLLCLSGMF SGLNLGLMAL DPMELRIVQN CGTEKEKNYA 120
  121 KRIEPVRRQG NYLLCSLLLG NVLVNTTLTI LLDDIAGSGL VAVVVSTIGI VIFGEIVPQA 180
  181 ICSRHGLAVG ANTIFLTKFF MMMTFPASYP VSKLLDCVLG QEIGTVYNRE KLLEMLRVTD 240
  241 PYNDLVKEEL NIIQGALELR TKTVEDVMTP LRDCFMITGE AILDFNTMSE IMESGYTRIP 300
  301 VFEGERSNIV DLLFVKDLAF VDPDDCTPLK TITKFYNHPL HFVFNDTKLD AMLEEFKKGK 360
  361 SHLAIVQRVN NEGEGDPFYE VLGIVTLEDV IEEIIKSEIL DETDLYTDNR TKKKVAHRER 420
  421 KQDFSAFKQT DSEMKVKISP QLLLAMHRFL ATEVEAFSPS QMSEKILLRL LKHPNVIQEL 480
  481 KYDEKNKKAP ECYLYQRNKP VDYFVLILQG KVEVEAGKEG MKFEASAFSY YGVMALTASP 540
  541 VPLSLSRTFV VSRTEVLAAG SPGENKSPPR PCGLNHSDSL SRSDRIDAMT PTLGSSNNQL 600
  601 SSSFLQVYIP DYSVRALSDL QFVKISRQQY QNALMASRMD KTPQSSDSEN TKIELTLTEL 660
  661 HDGLPDETAN LLNEQNCVSH NKANHSLHSE GAI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle