YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|32766568, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.51
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLRGKVFAV SALSVVIFVV FYHSQLSLPN LYQQLNSSSE RTSVTICDYG LQNHTFFTTG  60
   61 DTSPHPLERL SCPQYRIQSH YITSPLSEEE AAFPLAYIMV IHKDFDTFER LFRAIYMPQN 120
  121 VYCVHVDSKA TDTFKEAVRQ LLSCFPNAFL ASKVEQVVYG GFSRLQADLN CMKDLVASKV 180
  181 PWKYVLNTCG QDFPLKTNKE IINHLKRFKG KNITPGVLPP AYIVVRTKYV HQERKGKDGY 240
  241 FMHKTNILKT PPPHQLIIYF GTAYVALTRD FVNFILNDER AIALLEWSKD TYSPDEHFWV 300
  301 TLNRIPGVPG SMPPNASWTG NLRAVKWMDM EAKHGGCHGH YVHGICIYGN GDLQWLINSQ 360
  361 SLFANKFELN TYPLTVECLE LRLRERTLNQ SEIAIQPSWY F

Type	Start	End	Confidence
Signal Peptide	1	24	0.51
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	401	0.99