YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|6679451, gi\|1...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMASSCSRRL LAAALLPWCC AAWALGHLDP PSPPPLVIWH GMGDSCCNPM SMGVIKKMVE  60
   61 KEIPGIYVLS LEIGKNMMED VENSFFLNVN VQVNMVCQIL EKDPKLQQGY NAIGFSQGGQ 120
  121 FLRAVAQRCP TPPMMTLISV GGQHQGVFGL PRCPGESSHI CDFIRKSLNA GAYSKLVQER 180
  181 LVQAQYWHDP IKESVYRNYS IFLADINQER CVNESYKKNL MALKKFVMVK FFNDSIVDPV 240
  241 DSEWFGFYRS GQAKETIPLQ ESTLYTEDRL GLKKMDKAGK LVFLAKEGDH LQISKEWFTA 300
  301 HIIPFLK

Type	Start	End	Confidence
Signal Peptide	1	24	0.98
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	307	0.99