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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SPIT1_MOUSE
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGRRLARAS ISAVGVWLLC ALGLQATEAE LPSAPAELPG GAACLSRFTS GVPSFVLDTE  60
   61 ASVSNGATFL GSPTARRGWD CVRSCCTTQN CNLALVELQP DGGEDAISAC FLMNCLYEQN 120
  121 FVCKFAPKEG FINYLTQELY RSYRELRTRG FGGSRIPRIW MGIDLKVQLQ KPLVLNEADN 180
  181 TDWHLLQGDS DVRVERKRPE EVELWGLKEG TYLFQLTRTD SDQPEETANL TITVLTAKQT 240
  241 EDYCLASYKV GRCRGSFPRW YYDPKEQICK SFTFGGCLGN KNNYLREEEC MLACKDVQGI 300
  301 SPKRHHPVCS GSCHATQFRC SNGCCIDGFL ECDDTPDCPD GSDEATCEKY TSGFDELQNI 360
  361 HFLSDKGYCA ELPDTGFCKE NIPRWYYNPF SERCARFTYG GCYGNKNNFE EEQQCLESCR 420
  421 GISKKDVFGL RREGSIPTVG SAEVAIAVFL VICIIVVLTI LGYCFFKNQR KEFHSPLHHP 480
  481 PPTPASSTVS TTEDTEHLVY NHTTQPL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle