YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|26346428, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.48
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNVGVAHSEV NPNTRVMNSR GMWLTYALGV GLLHIVLLSI PFCSVPVAWT LTNIIHNLGM  60
   61 YVFLHAVKGT PFETPDQGRA RLLTHWEQLD YGVQFTSSRK FFTISPIILY FLASFYTKYD 120
  121 PTNFILNTAS LLSVLIPKMP QLHGVRIFGI NKY

Type	Start	End	Confidence
Cytoplasmic	1	21	0.84
Transmembrane Helix	22	49	0.79
Non-Cytoplasmic	50	100	0.50
Transmembrane Helix	101	116	0.48
Cytoplasmic	117	153	0.50