YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	F134B_MOUSE
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.56
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPAGGGCGPG RSWEVINSKP DERARLSQCI AESWMNFSMF LQEMSLFKQQ SPGKFCLLVC  60
   61 SVCTFFTILG SYIPGVILSY LLLLFAFLCP LFKCNDIGQK IYSKVKSILL KLDFGIGEYI 120
  121 NQKKRERSEA DKEKSHKDDS ELDFSALCPK ISLTVAAKEL SVSDTDVSEV SWTDNGTFNL 180
  181 SEGYTPQTDT SDDLDRPSEE VFSRDLSDFP SLENGTGTND EDELSLGLPT ELKRKKQQLD 240
  241 SAHRPSKERQ SAAGLSLPLK SDQALHLMSN LAGDVITAAM TAAIKDQLEG ARQALTQVAP 300
  301 TAGEDTDTEE GDDFELLDQA ELDQIESELG LTQDQGAEAQ QSKKSSGFLS NLLGGH

Type	Start	End	Confidence
Cytoplasmic	1	54	0.93
Transmembrane Helix	55	87	0.76
Non-Cytoplasmic	88	356	0.56