YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|33239415, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.93
Topology Confidence:	0.61
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMLSKFLTME YLVHPGTLSL AAGVACGMCL GWGLRSHLGM FPQNSTSEAN RDTETGTEAS  60
   61 ILGESGEYKM ILVVRTDLKM GKGKVAAQCS HAAVSAYKQT QRRSPQVLKE WEYCGQPKVV 120
  121 VKAPDEDTLI QLLTHAKTLG LTVSLIQDAG RTQIEPGSRT VLGIGPGPVE LIDEVTGHLK 180
  181 LY

Type	Start	End	Confidence
Cytoplasmic	1	11	0.61
Transmembrane Helix	12	34	0.85
Non-Cytoplasmic	35	182	0.71