YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: OTOAN_MOUSE
Protein type: Globular with Signal Peptide
Type Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQGPRTCSL LLVLLLSHGG AYQREPSPRQ DLHPLLQKMA EEIIEGSYLN ALLDLTLFER  60
   61 SHVWTADLSH RVLAYLNSKN VAFTIPSLQA VMEAHLEQYL YQPQKLLEDL RATDNQQFHT 120
  121 AMKCLLEDKW GHLDLEDVVI NLGDIRDEAL QSPGVNRSLF LITLERCFQV LNALECVEVL 180
  181 GRVLRGSSGS FLQPDITERL PQDLHEDAFK NLSAVFKDLY DQTSAHTQRA LYSWMTGILR 240
  241 TPFNVTDGSV SWVSAEKLWI LGRYMVHLSF EEIMNISPIE IGLFISYDNA TKQLDMVYDI 300
  301 TPELAQAFLE RIRCSSFDVR NISTIHRLGL LVCFYDGLEL LDATLAQVLL HQMLKCSRLR 360
  361 GFQAGVQKLK ANLLDIATEN QTLNETLGSL SDAVVGLTSS QLESLSSDAV HSAISTLNQV 420
  421 TGWGRSQIVI LSAKYLAQEK VLSFYNVCQM GVLLAGVGTQ AFYSMDHKDL WQVLRSPLSQ 480
  481 DMSDLSPVQQ QGVLGKLMEA EDATSGIAEV PRALFKEVSL YDLWKESRFN ATVLKAKELR 540
  541 RSQALFLYEF LGKTTERPEE LLSAGQLVKG VPCSHIDAMS DHLFLALFQY FDNNFSLLSP 600
  601 DQVNCLAWKY WEVSRSSMPP FLLATLPSRF LSSIPPSRCV RFLISLGKRR LETLVLDSDK 660
  661 RSVVVRKVQQ CLDGVIADEY TVDIVGHLLC HLPASFIERG ISPRAWAAAL HGLRSCTALS 720
  721 SEQKAAVRVR LLEQWGPPEN WTAETTKDLA PFLAFFSGDE LHTVATKFPE ILQQTASKMV 780
  781 GVLLPKEFLW AVFESVQNSS NESPSFDPTF GCHGVVTPSS DDIFKLAEAN ACWDPEVLLC 840
  841 MEEDTFIRNV ELLGAVKGFS RAQLMALKEK AIQVWDLPSR WKEHHIVSLG RIALALSESE 900
  901 LEQLDLSSID TVASLGQQTE WTPGQAKSIL QAFLEDSGYG IQDLKSFHLV GFGPTLCAMD 960
  961 PTEIQLIKTS EFRAVVARIG TLFCSTPVLA GFKKKAEVVF GRPTEWTSSI LQELGTIAAG1020
 1021 ITKAELRMLN KELMTYFQPS AIRCLPGEVF KELSTEQIAS LGPQNAASVT HSQRLQLSSA1080
 1081 QLQSLQRALD GAKTHSWQTD PLSSSPTWPA STGSPTGEPA SQALWLGCTL LLLTAKS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle