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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|15809042, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.70
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEIKDQGAQM EPLLPTRNDE EAVVDRGGTR SILKTHFEKE DLEGHRTLFI GVHVPLGGRK  60
   61 SHRRHRHRGH KHRKRDRERD SGLEDGRESP SFDTPSQRVQ FILGTEDDDE EHLPHDLFTE 120
  121 LDEICWREGE DAEWRETARW LKFEEDVEDG GERWSKPYVA TLSLHSLFEL RSCILNGTVL 180
  181 LDMHANTIEE IADMVLDQQV SSGQLNEDVR HRVHEALMKQ HHHQNQKKLA NRIPIVRSLA 240
  241 DIGKKQSEPN SMDKNAGQVV SPQSAPACAE NKNDVSRENS TVDFSKVDLH FMKKIPPGAE 300
  301 ASNILVGELE FLDRAVVAFV RLSPAVLLQG LAEVPIPSRF LFILLGPLGK GQQYHEIGRS 360
  361 IATLMTDEVF HDVAYKAKDR NDLVSGIDEF LDQVTVLPPG EWDPSIRIEP PKNVPSQEKR 420
  421 KIPAVPNGTA AHGEAEPHGG HSGPELQRTG RIFGGLMLDI KRKAPFFWSD FRDAFSLQCL 480
  481 ASFLFLYCAC MSPVITFGGL LGEATEGRIS AIESLFGASM TGIAYSLFGG QPLTILGSTG 540
  541 PVLVFEKILF KFCKEYGLSY LSLRASIGLW TATLCIILVA TDASSLVCYI TRFTEEAFAS 600
  601 LICIIFIYEA LEKLFELSET YPINMHNDLE LLTQYSCNCM EPHSPSNDTL KEWRESNLSA 660
  661 SDIIWGNLTV SECRSLHGEY VGRACGHGHP YVPDVLFWSV ILFFSTVTMS ATLKQFKTSR 720
  721 YFPTKVRSIV SDFAVFLTIL CMVLIDYAIG IPSPKLQVPS VFKPTIYDRG WFVTPLGPNP 780
  781 WWTIIAAIIP ALLCTILIFM DQQITAVIIN RKEHKLKKGC GYHLDLLMVA VMLGVCSIMG 840
  841 LPWFVAATVL SITHVNSLKL ESECSAPGEQ PKFLGIREQR VTGLMIFILM GSSVFMTSIL 900
  901 KFIPMPVLYG VFLYMGASSL KGIQLFDRIK LFWMPAKHQP DFIYLRHVPL RKVHLFTVIQ 960
  961 MSCLGLLWII KVSRAAIVFP MMVLALVFVR KLMDFLFTKR ELSWLDDLMP ESKKKKLEDA1020
 1021 EKEEEQSMLA MEDEGTVQLP LEGHYRDDPS VINISDEMSK TAMWGNLLVT ADNSKEKESR1080
 1081 FPSKSSPS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle