YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|12842547, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.69
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFGGLSSWLG LKPPEGAAAE GEEPPSRDGD KLSAGAAPSE ESPERPVEPT EEQQQQPPTE  60
   61 DPQFLHQAKG LGNYLYNFAS AATKKITESV TETAQTIKKS VEEGKIDDIL DKTILGDFQK 120
  121 EQKKFVEEQN TKKSEAAVPP WVESHDEETI QQQILALSAD KRNFLRDPPA GVQFNFDFDQ 180
  181 MYPVALVMLQ EDELLSKMRF ALVPKLVKEE VFWRNYFYRI SLIKQSAQLT ALAAQQQASG 240
  241 KEKKSSNRDD NLPLTEAVRP KTPPVVIKSQ LKSQEDEEEI STSPGVSEFV SDAFDTCSLN 300
  301 QEDLRKEMEQ LVLDKKQEEA TALEEDSTDW EKELQQELQE YEVVAESEKR DENWDKEIEK 360
  361 MLQES

Type	Start	End	Confidence
Signal Peptide	1	19	0.68
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	365	0.99