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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CG32000-PG
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.71
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHYVATESVQ PKKSDKVPSN KIKKVENNNT LVNGCSKTSA RSVPLLKYNR PDQDGDSEEN  60
   61 ITSVLEPNVD EIYSKDSERL VDDSKPCIGL LNPDQEDQMK VCGYRRSLMR TGFCWACIFL 120
  121 TGGLLRLVLH WWRHLYLYAT CSQCSLEEAE QVLVTEDYQG KHKMYHVKQI QVLTSSNLKT 180
  181 LLEKEQQSIE RTHIECDHVE NVLQLSVHFT SAQFKKCSSI RIFRCKQLVY AWNNNTNRFQ 240
  241 RINGLDLNIP CSYYHQQRGL PVHEQISRRI VFGDNEITVP LRDFKTLLFL EVLNPFYVFQ 300
  301 LFSVILWFTY DYYYYACVIL LMSVFGITVS VLQTKKNQDV LQKTVYNTGN AWVVDHKGLS 360
  361 KELPTRAIVP GDIIEIPSSG CTLHCDAILI SGNCILDESM LTGESVPVTK TPLPSKRDMI 420
  421 FDKTEHARHT LFCGTKVIQT RYIGSKKVLA FVINTGNITA KGELIRSILY PPPVDYKFEQ 480
  481 DSYKFIQFLA IIACVGFIYT LVTKILRGTD PVKIAVESLD LITIVVPPAL PAAMTVGRFY 540
  541 AQKRLKTSEI FCISPRSINV AGSINCCCFD KTGTLTEDGL DMWGVVPKSS TNQFQIPLKS 600
  601 VDRLPFDHFL FGMVTCHSIT ILNGRMMGDP LDLKMFESTG WELEDSNNIP DTEKYGILYP 660
  661 TILRQPRGGL SGMAETESGS KNEIKRQSSV DDLLATVGIS PSQKNFDHGI VREFPFTSAL 720
  721 QRMSVVTRCL SDQVFNVYCK GSPEMLKKLC KPQSLPDNYS QQLSEFAKKG YRIIAIAFKA 780
  781 LSHKMNYTKV QRLSREEVEN NMEFLGFVIL ENRLKPDTTK VINALNAAKI RTIMITGDNI 840
  841 LTAISVARDC GIVSPSQSVI TVHADPIGDS ANIQTNTGTE CNFDNSSDKH YKLHYTLDLG 900
  901 SKTSRAYLFK SCFNSNLFDP ETPEFTAQVG KTIFHMESTN SLVNESTSSY AESGLPTSDS 960
  961 LASVKTIDTW THNDAELGIK HTPDESWRRQ ECIFAMDGKT WQIVKDYFPE EMEILLTRGS1020
 1021 IYARMSPDQK QALVIELQNL DYCVAMCGDG ANDCGALKVA HAGISLSETE ASIASPFTSR1080
 1081 NPTISAVLKV IKEGRAALVT SFGIFKYMAA YSLVQFISVM ILYSIDSNLT DKQYLYVDLG1140
 1141 LISIFAFFFG KTESFDGMLV EQVPLSSLIS STPLASLLLH LTVVTAFQVT CWVHLHQQPW1200
 1201 FKAFEPADED HLGCFENYTM FCISSFQYII LAFVFSKGAP YRKPLWSNWP LCLAFIVNLC1260
 1261 IIVYLVLYPS DWVASFFQLI VPPTMRFRYV MLAYGAASFI CHIFVESFLV EYLVFKKYQV1320
 1321 KREKNWVTSK QKYMRLEHDI SNIKNWPPIT EVYEPNNLID CETEQPTYVS LHAEQNHDTQ1380
 1381 LGKFPGFC

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle