YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	Syt7-PB
Protein type:	Transmembrane
Type Confidence:	0.86
Topology Confidence:	0.66
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASIVLIACL AILGLIITIA LFLAGGYLWW RHKRSQLQFI EPNEDEESSS YSLRAAQDIV  60
   61 DSGNPPTKPQ VPVAHAITTP LQNNINRKLN GFLSLRTPLI GGSGASQTKP QIISSVGNPG 120
  121 DGTTKDSANK SISMTDMYLD STDPSENVGQ IHFSLEYDFQ NTTLILKVLQ GKELPAKDLS 180
  181 GTSDPYVRVT LLPDKKHRLE TKIKRRTLNP RWNETFYFEG FPIQKLQSRV LHLHVFDYDR 240
  241 FSRDDSIGEV FLPLCQVDFA GKQSFWKALK PPAKDKCGEL LSSLCYHPSN SILTLTLIKA 300
  301 RNLKAKDING KSDPYVKVWL QFGDKRF

Type	Start	End	Confidence
Cytoplasmic	1	6	0.66
Transmembrane Helix	7	30	0.81
Non-Cytoplasmic	31	327	0.85